python-neo – Python IO library for electrophysiological data formats

NEO stands for Neural Ensemble Objects and is a project to provide common classes and concepts for dealing with electro-physiological (in vivo and/or simulated) data to facilitate collaborative software/algorithm development. In particular Neo provides: a set a classes for data representation with precise definitions, an IO module with a simple API, documentation, and a set of examples.

NEO offers support for reading data from numerous proprietary file formats (e.g. Spike2, Plexon, AlphaOmega, BlackRock, Axon), read/write support for various open formats (e.g. KlustaKwik, Elan, WinEdr, WinWcp, PyNN), as well as support common file formats, such as HDF5 with Neo-structured content (NeoHDF5, NeoMatlab).

Neo’s IO facilities can be seen as a pure-Python and open-source Neuroshare replacement.

Package availability chart

Distribution

Base version

Our version

Architectures

Debian GNU/Linux 11.0 (bullseye)

0.9.0-1

Debian GNU/Linux 12.0 (bookworm)

0.11.1-1

Debian GNU/Linux 9.0 (stretch)

0.3.3-2

0.3.3-1~nd80+1+nd90+1

i386, amd64, sparc, armel

Debian testing (trixie)

0.13.4-1

Debian unstable (sid)

0.13.4-1

0.3.3-1~nd+1

i386, amd64, sparc, armel

Ubuntu 16.04 “Xenial Xerus” (xenial)

0.3.3-2

Ubuntu 18.04 “Bionic Beaver” (bionic)

0.3.3-2

Ubuntu 20.04 “Focal Fossa” (focal)

0.7.2-2

Ubuntu 22.04 “Jammy Jellyfish” (jammy)

0.10.0-1

Ubuntu 24.04 “Noble Numbat” (noble)

0.12.0-3

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